R/annotations.R
artmsMapUniprot2Entrez.Rd
Map GENE SYMBOL, NAME, AND ENTREZID to a vector of Uniprot IDS
artmsMapUniprot2Entrez(uniprotkb, species)
uniprotkb | (vector) Vector of UniprotKB IDs |
---|---|
species | (char) The species name. Species currently supported
as part of artMS: check |
(data.frame) with ENTREZID and GENENAMES mapped on UniprotKB ids
# Load an example with human proteins exampleID <- c("Q6P996", "B1N8M6") artmsMapUniprot2Entrez(uniprotkb = exampleID, species = "HUMAN")#> UNIPROT SYMBOL #> 1 Q6P996 PDXDC1 #> 2 B1N8M6 KIR2DS1 #> GENENAME #> 1 pyridoxal dependent decarboxylase domain containing 1 #> 2 killer cell immunoglobulin like receptor, two Ig domains and short cytoplasmic tail 1 #> ENTREZID #> 1 23042 #> 2 3806