It takes as input the imputedL2fcExtended.txt results generated by the artmsAnalysisQuantifications() function and generates the Phosfate input file (or data.frame) Please, notice that the only species suported by Phosfate is humans.

artmsPhosfateOutput(inputFile, output_dir = ".", verbose = TRUE)

Arguments

inputFile

(char) the imputedL2fcExtended.txt file name and location

output_dir

(char) Name of the folder to output results (Default: current directory. Recommended: phosfate_input)

verbose

(logical) TRUE (default) to show function messages

Value

Multiple output files (inputs of phosfate)

Examples

# \donttest{ artmsPhosfateOutput(inputFile)
#> Error in is.data.table(input_file): object 'inputFile' not found
# }